Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919454.1_cds_XP_016468665.1_61277
CDS Infomation

[gene=LOC107791167] [db_xref=GeneID:107791167] [protein=protein plastid transcriptionally active 16, chloroplastic-like] [protein_id=XP_016468665.1] [location=complement(join(47939..48446,48530..48588,49450..49518,49835..50287,51462..51694,52224..52431))] [gbkey=CDS]
Sequence

ATGGCTCCAACTCTTACTTCAAATTCATTTCTCCTTACAACTACACCCCATCCAAGATTA
TCATTCAAGAATTCAAGATTCACTGTTTTTGCAAAGAAGTCTGGACCTTTCCCAAGTTTT
CGCCTTGGCAAATCAGCTGAGTCTTCTAATGAGGAAAATCAAGAAACTACTACAAGCAAT
TCTAGCATTCCCTTCAGTTTTGACTTTGGTAAGTTACCTGATGTGAAGTCTTTGATACCT
GTTAGCACCAATCCATCTTCTGGTTTGGCTTTTGGAAGGCAAAGGGCAAAGGATCCTGGA
ACAGTTTTTGTTGCTGGTGCTACTGGACAAGCTGGTGTCCGCATTGCACAGACGTTGCTT
CGCGAAGGTTTTAGTGTCAGAGCTGGAGTTTCTGACCTTGGTGCAGCCCAAGAGCTAGCT
CAGTTAGCCGTTAGCTACAAGGTAATCTCTAACGATGAGTCAAAACGCCTGAATGCGGTT
GCATCCACATTTCAAGATGCAGAATCAATCGCAAAAGCAATAGGAAATGCTAGCAAAGTT
GTGGTAACTATTGGTAAGGGAGAGGATGGTCCTACAACTGAAGTCACCACAACAGATGCC
GTACAAGTAATACAAGCTGCACAATTAGCTGGTGTCGGGCATGTGGCCATAGTCTATGAT
GAATCTTCTTCAATAGGCTCTACCTACAATGTGCTCGACGGCATTACATCTTTCTTCAAC
AATCTGTTCTCAAAATCTCAACCACTGACGATATCGGAGTTTCTACAGAAGATAGTGGAG
ACAGATGTGAGCTATACACTCATAAAAACCAGCTTAACAGAGGATTTCTCCCCTGAGAGC
TCATACAACATCGTCGTGTCAGCTGAAGGGAGTGCTGGTGAAAACGCCTACAAAGTGGCT
AAGTCTGAGATAGCTAAGCTAGTGGTGGATGTTTTCTCCAACACTGCAGTGGCAGAAAAT
AAGGTTGTGGAAGTCTTTACCGATCCATCAGCATCAAAAAAGACTGTGGATGAACTTTTT
AGCACGATTCCCGTGGATGGACGGAGAAAGGCTTATGCAGAAGCACTTGAAAAATCGAAA
GCTGAGGAAGAAGCTCGACAAGCTGCTGAAGCGTCCAAGAGACAGGAAGAAGAGGCGAAG
AAGCTCGTAAAGAAAGAAGCAAAGGCTGCTAACGTTGCTAAAGAAGCTGAAGAGAAGGAT
TCATCAGCCGCAGGTCCGTCTGTTGAAAGTCTATTGGACAAAGCAAAAGGCTTAAGTATA
GGATTTTCAATTGAAAAGTTCAGCTCGCAATTGAAATCAGCTGTTGAAAAGGTCGGCGAG
GAATCAACGCAGGTAGCTACCGTTAGGGGACAGGCCAAGGCCAGAAATTTGCCTGCTCAG
AAAGCAGTGATCAAAACTCCTCCTAGGAAACCATTTGCTTCGAAAAAGAATGAGGCGCCA
AAACCAACAAAACAAACAGAGACTAAAACTGAGACGAGGAAGGTTTTTGGCGGGCTGTTT
CAGCAAGAAACCATCTATGTTGATGATTAA

Peptide Sequence

PEP ID

XP_016468665.1
PEP Infomation

PREDICTED: protein plastid transcriptionally active 16, chloroplastic-like [Nicotiana tabacum]
Sequence

MAPTLTSNSFLLTTTPHPRLSFKNSRFTVFAKKSGPFPSFRLGKSAESSNEENQETTTSN
SSIPFSFDFGKLPDVKSLIPVSTNPSSGLAFGRQRAKDPGTVFVAGATGQAGVRIAQTLL
REGFSVRAGVSDLGAAQELAQLAVSYKVISNDESKRLNAVASTFQDAESIAKAIGNASKV
VVTIGKGEDGPTTEVTTTDAVQVIQAAQLAGVGHVAIVYDESSSIGSTYNVLDGITSFFN
NLFSKSQPLTISEFLQKIVETDVSYTLIKTSLTEDFSPESSYNIVVSAEGSAGENAYKVA
KSEIAKLVVDVFSNTAVAENKVVEVFTDPSASKKTVDELFSTIPVDGRRKAYAEALEKSK
AEEEARQAAEASKRQEEEAKKLVKKEAKAANVAKEAEEKDSSAAGPSVESLLDKAKGLSI
GFSIEKFSSQLKSAVEKVGEESTQVATVRGQAKARNLPAQKAVIKTPPRKPFASKKNEAP
KPTKQTETKTETRKVFGGLFQQETIYVDD

Transcript Sequence

Gene sequence data has not been registered.